Comparison · 6 tools · prices checked on September 25, 2026
The best second brain apps in 2026
A second brain app holds years of notes, so the price matters less than two other questions: where the files live, and how hard it is to leave. Some store plain Markdown on your disk, others keep everything in their cloud. The ranking below weighs that reversibility alongside value, ease of use and depth.
The double spend to watch: a second brain app and a separate workspace holding the same notes. Pick where your notes live and keep one. If you only work on one device, Obsidian's paid Sync is an option you may not need at all.
Price of the comparison plan, as published by the vendor, in its currency. Annual prices are shown per month.
Tool by tool
1. Obsidian
Markdown note-taking
From $4/moScore 4/5 · Great
Obsidian is a free, local-first Markdown note-taking app with bidirectional linking, a plugin ecosystem, and optional paid sync and publish services.
Free plan: Core desktop/mobile app is free with no feature restrictions; commercial use is allowed without payment
Core app is free even for commercial use, with no feature limits and no sign-up required.
Notes stay as local Markdown files, so they remain readable and portable even without Obsidian.
No built-in real-time collaboration; shared, co-edited vaults depend on the paid Sync service.
Cross-device syncing is not part of the free app and requires either the paid Sync add-on or a manual/third-party setup.
Keep it if
You want your notes as plain, portable Markdown files with linking and a plugin ecosystem, and you're comfortable setting up your own sync if you skip the paid option.
Avoid it if
Your team needs built-in real-time co-editing; Obsidian has no live collaboration feature at any price.
Logseq is a free, open-source local-first knowledge graph app with an outliner and optional cloud sync.
Free plan: The core local-first app is free and open source; Sync (cloud sync/backup) is only available via a recurring Open Collective contribution during its beta phase.
Core app is completely free, open source and local-first, with no lock-in.
Notes stored as plain markdown files, making export and backup straightforward.
Sync is still in beta and priced as an Open Collective contribution, not a stable commercial plan.
Whiteboards are locked behind the higher Sponsor tier, and Smart Merge for multi-device editing is experimental.
Keep it if
You want a free, local-first knowledge graph you fully own, with optional paid sync for multi-device access.
Avoid it if
You need a stable, fully commercial cloud sync today rather than a beta contribution model.
Before you pay
Sync pricing is currently a recurring donation during beta and is expected to change to a standard subscription once Sync launches publicly.
Heptabase is visual note-taking software with infinite-canvas whiteboards and a built-in AI agent, sold only as a paid subscription after a 7-day trial.
Infinite-canvas whiteboards make it easy to visually connect notes instead of relying on a linear structure.
Unlimited notes, whiteboards and tags are included even on the entry Pro plan.
No permanent free plan: only a 7-day trial before a paid subscription is required.
AI usage is capped by a credit system that varies sharply between plans, from 100 to 8,100 credits a month.
Keep it if
Keep it if you build a long-term, visual knowledge base and are willing to pay from day one.
Avoid it if
Avoid it if you want a free note-taking tool or heavy AI usage on a budget: credits run out fast on the entry plan.
Before you pay
Premium+ mentions discounted extra AI credits, implying add-on credits can also be purchased beyond the plan's monthly quota.
The ranking follows the ToolTrim five-axis score, each axis backed by a source cited on the tool's page. When two scores tie, the more searched tool goes first. Prices come from each vendor's official page, never converted. Links to vendors may be affiliate links; they change neither the score nor the position.
Frequently asked questions
What is the best option for freelancers who think in notes?
Obsidian tops this ranking with a ToolTrim score of 4/5. The right pick still depends on how you work: each entry states when to keep it and when to avoid it.
Is there a free option?
Yes. Obsidian, Logseq and Notion offer a permanent free plan. The best rated of them here is Logseq.
What is the cheapest paid option?
Heptabase, from $8.99/mo, based on the price the vendor publishes.
How is this ranking built?
Each tool is scored on five axes (added value, simplicity, day-to-day use, power, reversibility), each score backed by a source cited on its page. Prices are read on the vendor's official page, in its currency. No vendor pays for its position.